Iso-seq data for bonobo from fibroblast cell lines - SRA

SRX23110497: Iso-seq data for bonobo from fibroblast cell lines
1 PACBIO_SMRT (Sequel II) run: 347,609 spots, 750.8M bases, 329.6Mb downloads

Design: RNA was extracted from cultured bonobo fibroblast KB8711 and processed following manufacturer's instruction.

Submitted by: University of Washington

Study: Long- and short-read RNA sequencing for ape genome annotation

PRJNA1016395 • SRP477373 • All experiments • All runs

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Long-read (PacBio Iso-Seq) and short-read (Illumina-based RNA-seq) RNA sequencing were performed for the purpose of genome annotation. The target genomes are cell lines sequenced for telomere-to-telomere genome references: bonobo (Pan paniscus), chimpanzee (Pan troglodytes), gorilla (Gorilla gorilla), Sumatran orangutan (Pongo abelii), Bornean orangutan (Pongo pygmaeus), siamang (Symphalangus syndactylus), and hoolock (Hoolock leuconedys).

Sample: bonobo

SAMN13935689 • SRS6111929 • All experiments • All runs

Organism: Pan paniscus

Library:

Name: PR00251_PPA_IS-1

Instrument: Sequel II

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA_oligo_dT

Layout: SINGLE

Runs: 1 run, 347,609 spots, 750.8M bases, 329.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR27438211	347,609	750.8M	329.6Mb	2024-01-06

ID:: 31221633

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